SMBE Satellite Meeting on Eukaryotic -Omics: April 29 – May 2, 2013, UC Davis Conference Center

Myself and my former PI (Kelley Thomas at the University of New Hampshire) recently received funding from The Society for Molecular Biology and Evolution to hold an SMBE Satellite Meeting focused on Eukaryotic -Omics at UC Davis this spring. All interested researchers are encouraged to attend!

Meeting description: The SMBE Satellite Meeting on Eukaryotic -Omics will bring together an interdisciplinary pool of researchers to discuss current efforts, challenges, and future directions for high-throughput sequencing approaches focused on microbial eukaryotes (environmental studies of non-model organisms). The meeting program will encompass investigations of eukaryote biodiversity, ecology, and evolution, using approaches such as rRNA marker genes, shotgun metagenomics, metatranscriptomics, and computational biology tools and software pipelines. In addition, we are hosting a 2.5 day QIIME workshop directly following the main meeting, running Thursday afternoon May 2nd until Saturday May 4th.

Abstract submission is now open (Deadline February 22, 2013), and travel grants are available. Registration details available here on on the SMBE meeting website.

PLoS ONE paper – oil spill impacts in the Gulf of Mexico

The first results are out from our ongoing work investigating the impacts of the 2010 Deepwater Horizon oil spill on sediment microbial eukaryote communities. This work was made possible by an NSF RAPID grant awarded to our collaborative group at the University of New Hampshire, Auburn University, and the University of Texas San Antonio. You…

TREE Review and Spring Travel Schedule

Pleased to announce the publication of our new review paper in Trends in Ecology and Evolution – this paper is an overview of high-throughput marker gene sequencing approaches (18S rRNA), aimed at a general audience of biologists and ecologists. If you’ve been searching for a non-technical overview of the current computational pipelines (e.g. you have some…

New year, New job, New website

2012 is turning out to be a year of fresh starts. After almost 2 years working at the University of New Hampshire, I’ve now officially relocated myself 3000 miles to the West. I’m very excited to join Jonathan Eisen’s lab in the Genome Center at the University of California, Davis. I’ll be continuing to work with…